Search found 11 matches

by cwandtj
Mon Jul 16, 2012 8:19 pm
Forum: Bader
Topic: Negative charge problem
Replies: 3
Views: 15428

Re: Negative charge problem

That was prompt fix! Thank you! I tried the new version and it works well without any problem. By the way, I am trying to let our group members know this update. Would you explain me more about "right-hand coordiate system"? This simly indicates that previous Bader code read only non-negat...
by cwandtj
Thu Jul 12, 2012 7:18 pm
Forum: Bader
Topic: Negative charge problem
Replies: 3
Views: 15428

Negative charge problem

Hello, This is similar problem with previous one ( http://theory.cm.utexas.edu/forum/viewtopic.php?f=1&t=1112 ) Files that I will discuss at here can be found from following Dropbox link: https://www.dropbox.com/sh/qfjn35r36rg264b/bOPaAITEpU OK... I will explain my situation. I produced cube fil...
by cwandtj
Mon Jun 07, 2010 12:14 am
Forum: VTSTTools
Topic: About POSCAR format in NEB calculations
Replies: 1
Views: 5729

About POSCAR format in NEB calculations

In using nebmake.pl, I realized that if the sequence of atoms are not identical between two POSCAR files, nebmake.pl is not working correctly, For instance, let's assume that two POSCAR files (POSCAR_1 and POSCAR_2) are having position information of A,B,C, and D atoms, and POSCAR_1 has them as ABCD...
by cwandtj
Wed May 26, 2010 1:50 am
Forum: VTSTTools
Topic: Clarification about previous answers
Replies: 7
Views: 16294

Clarification about previous answers

In previous answer for other users' question, it is explained that: "When I talk about forces being accurate enough near the minimum, I'm referring to the errors in the forces which are controlled by the electronic convergence criteria, ediff. When the forces are larger than the errors, curvatu...
by cwandtj
Thu Jun 18, 2009 9:51 pm
Forum: VTSTTools
Topic: Simple question on DYNMAT
Replies: 6
Views: 18876

Re: Simple question on DYNMAT

I am trying to use DYNMAT rather than IBRION=5 in VASP code. What I am trying to do is as follows: Calculate vibrational frequencies of oxide bulk, oxide surface, and adsorbate on the oxide surface. I've read documents about DYNMAT and related codes and got following questions: 1) I understand that ...
by cwandtj
Wed May 20, 2009 4:52 am
Forum: VTSTTools
Topic: Simple question on DYNMAT
Replies: 6
Views: 18876

Re: Simple question on DYNMAT

I got additional question: Based on the answers here, I used IBRION=5 and got dynamic matrix as follows: 49 f = 4.185251 THz 26.296710 2PiTHz 139.604956 cm-1 17.308815 meV X Y Z dx dy dz 3.077752 1.971981 5.505232 0.493714 0.000264 0.054341 5.414283 5.915942 2.727125 0.493459 0.000274 -0.053818 2.58...
by cwandtj
Sat Apr 25, 2009 6:18 pm
Forum: VTSTTools
Topic: Simple question on DYNMAT
Replies: 6
Views: 18876

Simple question on DYNMAT

Hello, I am trying to get Phonons dispersion of my system [LaFeO3 (Perovskite)]. Based on the information on this forum, DYNMAT can give me information about phonon. However, I just want to be confirmed that DYNMAT can do that. Also, I want to know what is the difference between IBRION=5 in VASP cod...
by cwandtj
Fri Oct 10, 2008 10:04 pm
Forum: Bader
Topic: Bader analysis on surface
Replies: 3
Views: 9586

Re: Bader analysis on surface

Thank you for your reply. Even though the large volume of surface atoms, the charge from Bader analysis is OK if we assume that NG*F values are large enough? I am sure but If charge values influenced by each atom's volume, I think that large volume of surface atoms "may" influence the char...
by cwandtj
Fri Oct 10, 2008 2:51 pm
Forum: Bader
Topic: Bader analysis on surface
Replies: 3
Views: 9586

Bader analysis on surface

Hello. I did Bader charge analysis on my oxide surface. I used double numbers of NGXF, NGYF, and NGZF. The problem is atomic volumes for surface atoms are too large and corresponding charge values are also different and I don't know whether the results are OK or not. My questions are 1) Is it OK to ...
by cwandtj
Fri Sep 29, 2006 2:09 am
Forum: VTSTTools
Topic: About VASP setting in NEB and Dimer method
Replies: 2
Views: 11164

Thanks for your reply Dr. Henkelman.

Actually, my final goal is to see how oxygen molecules dissociate on surfaces and how oxygen adatom will diffuse into the surfaces...... That is why I believed that this is the place. I thought that I need to know how other people who use NEB, Dimer methods, etc set their EDIFF and EDIFFG for thier ...
by cwandtj
Thu Sep 28, 2006 9:16 pm
Forum: VTSTTools
Topic: About VASP setting in NEB and Dimer method
Replies: 2
Views: 11164

About VASP setting in NEB and Dimer method

Hi! I have a question about EDIFF and EDIFFG for VASP setting. I actually used following setting for my calculations. System: LaFeO3 EDIFF: 1E-07 EDIFFG: -0.0005 These were OK but for surface calculations, I can not have convergence with these setting. How you all set EDIFF and EDIFFG for your surfa...