neighbors.pl

Vasp transition state theory tools

Moderator: moderators

neighbors.pl

Postby CalNicole » Mon Jan 23, 2012 6:17 pm

Dear administrator,
I have been using neighbors.pl for a while to calculate neighbor distances. I found that it does not handle periodic boundary conditions well, especially for my monoclinic and hexagonal unit cells. This is mainly a warning to others who may use it.

Thanks,
Nicole
CalNicole
 
Posts: 1
Joined: Mon Jan 23, 2012 6:12 pm

Re: neighbors.pl

Postby graeme » Mon Jan 23, 2012 8:17 pm

Nicole,

Thanks for the feedback; I see that this script is very outdated. We'll update this to read POSCAR files and properly handle non-orthogonal cells.

Graeme
graeme
Site Admin
 
Posts: 1056
Joined: Tue Apr 26, 2005 4:25 am
Location: University of Texas at Austin

Re: neighbors.pl

Postby graeme » Fri Jan 27, 2012 6:10 am

Here is an updated script which reads a POSCAR file and should properly treat non-orthogonal cells.
Attachments
neighbors.pl.gz
(926 Bytes) Downloaded 28 times
graeme
Site Admin
 
Posts: 1056
Joined: Tue Apr 26, 2005 4:25 am
Location: University of Texas at Austin


Return to VTSTTools

Who is online

Users browsing this forum: No registered users and 1 guest

cron